STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_015923F-box/LRR-repeat protein 14. (418 aa)    
Predicted Functional Partners:
C7M84_010148
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.858
C7M84_013778
Cullin-1; Belongs to the cullin family.
    
 0.803
C7M84_015313
Putative RING-box protein 1A.
    
 0.716
C7M84_016506
Uncharacterized protein.
     
 0.700
C7M84_008251
Neural cell expressed developmentally down-regulated 8.
    
 0.669
C7M84_018283
TIP120 domain-containing protein.
    
 0.645
C7M84_014917
Putative cullin-3; Belongs to the cullin family.
    
 0.617
C7M84_014918
Putative cullin-3; Belongs to the cullin family.
    
 0.617
C7M84_021778
Putative NEDD8-activating enzyme E1 catalytic subunit-like isoform X1.
     
 0.554
C7M84_004912
NEDD8-activating enzyme E1 regulatory subunit.
     
 0.554
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.