STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_015917Chloride channel protein 7. (635 aa)    
Predicted Functional Partners:
C7M84_015916
Putative H(+)/Cl(-) exchange transporter 7.
 
     0.929
C7M84_008645
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
  
  
 0.591
C7M84_004705
Type II inositol-1,4,5-trisphosphate 5-phosphatase.
   
  
 0.589
MED19
Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
      
 0.586
C7M84_005836
Uncharacterized protein.
      
 0.578
C7M84_023966
Putative chloride ion current inducer protein.
      
 0.502
C7M84_000066
Uncharacterized protein.
      
 0.489
C7M84_016030
Glycosylphosphatidylinositol anchor attachment 1 protein.
      
 0.485
C7M84_003879
U4/U6 small nuclear ribonucleoprotein Prp3.
      
 0.463
C7M84_004330
U4/U6 small nuclear ribonucleoprotein Prp3.
      
 0.463
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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