STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_015636Putative NGFI-A-binding protein-like. (459 aa)    
Predicted Functional Partners:
C7M84_017528
Rotund.
    
 0.582
C7M84_002695
Putative Krueppel-like 1 isoform X2.
    
 0.582
C7M84_002694
Putative zinc finger protein.
    
 0.582
C7M84_018570
Chromodomain-helicase-DNA-binding protein Mi-2-like protein.
    
 0.519
C7M84_022727
PHD domain-containing protein.
    
 0.519
C7M84_010750
Chromodomain-helicase-DNA-binding protein Mi-2-like protein.
    
 0.519
C7M84_018569
Uncharacterized protein.
    
 0.519
C7M84_010749
Putative chromodomain-helicase-DNA-binding protein Mi-2-like isoform X5.
    
 0.519
C7M84_012349
Putative Nuclear transcription factor Y subunit beta.
      
 0.509
C7M84_001395
Putative zinc finger CCCH domain-containing protein 14 isoform X2.
      
 0.416
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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