STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_014795Putative vacuolar protein sorting-associated protein 33B-like; Belongs to the STXBP/unc-18/SEC1 family. (265 aa)    
Predicted Functional Partners:
C7M84_013230
Putative vacuolar protein sorting-associated protein 18-like isoform X2.
   
 0.961
C7M84_011519
CNH domain-containing protein.
   
 0.960
C7M84_009806
Putative spermatogenesis-defective protein 39-like isoform X2.
   
 
 0.957
C7M84_017253
RING-type domain-containing protein.
    
 0.950
C7M84_020520
Vacuolar protein sorting-associated protein 8-like protein.
    
 
 0.920
C7M84_006354
Rab9A.
    
 
 0.918
C7M84_014084
Putative syntaxin-7; Belongs to the syntaxin family.
    
 
 0.913
C7M84_012476
Putative vesicle transport through interaction with t-SNAREs-like 1A-like.
   
 
 0.912
C7M84_000428
Putative vacuolar fusion protein CCZ1-like.
    
 
 0.911
C7M84_006807
Putative vacuolar protein sorting-associated protein 16-like.
   
 0.909
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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