STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_014244Orthodenticle-related homeobox 5. (316 aa)    
Predicted Functional Partners:
C7M84_004223
B-cell lymphoma 6 protein.
    
 
 0.665
C7M84_022253
Protein fork head.
   
 
 0.618
C7M84_019595
Putative LIM/homeobox protein Lhx3-like isoform X1.
      
 0.572
C7M84_016323
Short gastrulation protein.
    
 
 0.572
C7M84_000766
Progestin membrane receptor component 1; Belongs to the cytochrome b5 family.
      
 0.559
C7M84_006209
Pox-meso.
      
 0.504
C7M84_019921
Optix.
   
 
 0.446
C7M84_019920
Optix.
   
 
 0.446
C7M84_024157
Hunchback transcription factor.
    
 
 0.422
C7M84_021417
Transcriptional activator ci.
    
 
 0.421
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.