STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_014034Male reproductive-related microfibril-associated protein. (456 aa)    
Predicted Functional Partners:
C7M84_019143
Putative zinc finger matrin-type protein 2.
   
 0.995
C7M84_019992
Putative pre-mRNA-splicing factor 38A-like.
   
 0.994
C7M84_007186
Uncharacterized protein.
   
 0.987
C7M84_006704
Pre-mRNA-processing factor 6.
   
 0.986
C7M84_000454
U4/U6 small nuclear ribonucleoprotein Prp31.
   
 0.979
C7M84_019410
WD40 repeat-containing protein SMU1.
   
 0.974
C7M84_019364
Pre-mRNA-processing-splicing factor 8.
   
 
 0.969
C7M84_025577
Putative ubiquitin-like protein 5 isoform X2.
    
 0.968
C7M84_005066
Putative splicing factor 3B subunit 1 isoform X1.
   
 
 0.967
C7M84_004151
Uncharacterized protein.
   
 
 0.967
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.