STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_012283Long-chain fatty acid transport protein 4. (467 aa)    
Predicted Functional Partners:
C7M84_008199
Putative Bardet-Biedl syndrome 1 protein-like.
   
 0.920
C7M84_005047
Uncharacterized protein.
   
 0.919
C7M84_023184
Uncharacterized protein.
   
 0.918
C7M84_017280
Putative Bardet-Biedl syndrome 4 protein-like.
   
 0.867
C7M84_005805
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.763
C7M84_020428
Uncharacterized protein.
    
 0.741
C7M84_020425
Uncharacterized protein.
    
 0.741
C7M84_014420
Testis kinesin-like protein KIFC1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.710
C7M84_018540
Putative non-specific lipid-transfer protein.
   
 
 0.613
C7M84_018538
Non-specific lipid-transfer protein-like.
   
 
 0.613
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.