STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_010770Protein N-terminal asparagine amidohydrolase. (428 aa)    
Predicted Functional Partners:
C7M84_013727
Protein N-terminal glutamine amidohydrolase.
    
 
 0.670
C7M84_012495
Putative arginyl-tRNA--protein transferase 1 isoform X3.
    
 
 0.629
C7M84_017725
RNA polymerase I-specific transcription initiation factor RRN3.
 
    
 0.603
C7M84_011301
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.596
C7M84_020512
Putative secreted protein.
      
 0.568
C7M84_002438
Pyridoxal-dependent decarboxylase domain-containing protein 1.
      
 0.568
C7M84_022729
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
      
 0.441
C7M84_014106
Uncharacterized protein.
      
 0.430
C7M84_018003
Putative nodal modulator 1.
      
 0.416
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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