STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_0104431-alkyl-2-acetylglycerophosphocholine esterase. (397 aa)    
Predicted Functional Partners:
C7M84_004457
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.
     
 0.913
C7M84_021850
Platelet-activating factor acetylhydrolase IB subunit beta-like protein.
     
 0.909
C7M84_003233
Platelet-activating factor acetylhydrolase.
  
  
 
0.909
C7M84_012360
Putative cholinephosphotransferase 1-like isoform X1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.902
C7M84_024665
Phospholipase A2.
     
 0.775
C7M84_007226
Phospholipase-like protein A2, group.
     
 0.674
C7M84_017060
Uncharacterized protein.
     
 0.666
C7M84_011380
Putative phospholipase A2C isoform X1.
     
 0.666
C7M84_003654
Putative phospholipase A2-like.
     
 0.666
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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