STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_009870Ring canal kelch-like protein. (605 aa)    
Predicted Functional Partners:
C7M84_014917
Putative cullin-3; Belongs to the cullin family.
    
 0.806
C7M84_014918
Putative cullin-3; Belongs to the cullin family.
    
 0.806
C7M84_003359
Mitotic spindle assembly checkpoint protein MAD2B.
    
   0.735
C7M84_015313
Putative RING-box protein 1A.
    
 0.646
C7M84_013778
Cullin-1; Belongs to the cullin family.
    
 0.626
C7M84_005047
Uncharacterized protein.
    
 0.595
C7M84_002570
Uncharacterized protein.
    
 0.591
C7M84_008251
Neural cell expressed developmentally down-regulated 8.
    
 0.583
C7M84_018283
TIP120 domain-containing protein.
     
 0.576
C7M84_014747
Putative NEDD8-conjugating enzyme UBE2F-like isoform X1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.564
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.