STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_009615Putative myosin-IB isoform X3. (211 aa)    
Predicted Functional Partners:
C7M84_002684
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.650
C7M84_024666
PDZ domain-containing protein.
    
 
 0.639
C7M84_007610
PID domain-containing protein.
    
 0.589
C7M84_003791
Uncharacterized protein.
    
 
 0.531
C7M84_001258
Ubiquitin-like domain-containing protein.
    
   0.526
C7M84_017045
Putative myosin-IB isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
  
     0.476
C7M84_022415
Ubiquitin/ribosomal L40 fusion protein.
    
   0.443
C7M84_001874
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.441
C7M84_018717
TOM1-like protein 2.
    
 
 0.421
C7M84_005523
Putative ADP-ribosylation factor-binding protein GGA3 isoform X1.
    
 
 0.421
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.