STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_008934Putative 60S ribosomal protein L18a-like. (216 aa)    
Predicted Functional Partners:
C7M84_002311
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.997
C7M84_019102
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.997
C7M84_005140
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
 
 
 0.997
C7M84_023327
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.997
C7M84_007223
60S ribosomal protein L21.
  
 0.992
C7M84_011533
60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
 0.992
C7M84_017296
Putative 60S ribosomal protein L14.
   
 0.992
C7M84_005505
Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 0.992
C7M84_003377
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.992
C7M84_008652
60S ribosomal protein L31.
  
 
 0.991
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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