STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_008916Uncharacterized protein. (1085 aa)    
Predicted Functional Partners:
C7M84_001874
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.659
C7M84_021273
Putative phosphatidylinositol-binding clathrin assembly protein LAP isoform X13.
   
 
  0.612
C7M84_007735
Putative AP-2 complex subunit alpha.
    
  0.593
C7M84_010562
Putative synaptotagmin-4-like.
   
  0.591
C7M84_007647
Putative synaptotagmin 1-like isoform X2.
   
  0.587
C7M84_009423
Putative HIV-1 rev binding protein, hrbl.
    
  0.580
C7M84_002833
Dyslexia susceptibility 1 candidate protein 1 protein-like.
    
 0.561
C7M84_002805
Putative ubiquilin-1 isoform X1.
    
  0.531
C7M84_019420
Ras-GEF domain-containing protein.
    
 0.495
C7M84_017824
Cation-dependent mannose-6-phosphate receptor.
     
 0.463
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.