STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_006464Zn-C2H2_12 domain-containing protein. (409 aa)    
Predicted Functional Partners:
C7M84_012810
RING finger protein 11.
   
 
 0.746
C7M84_021938
IKKepsilon1.
    
 0.740
C7M84_007144
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.662
C7M84_000375
Putative EF-hand calcium-binding domain-containing protein 2.
    
 0.631
C7M84_017630
Uncharacterized protein.
    
 
 0.616
C7M84_014082
N_BRCA1_IG domain-containing protein.
   
 
 0.615
C7M84_024919
Uncharacterized protein.
      
 0.537
C7M84_013180
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.496
C7M84_004924
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.489
C7M84_005682
Putative myosin heavy chain 95F isoform X2.
    
 
 0.489
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.