STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_006337N6-adenosine-methyltransferase 70 kDa subunit; Belongs to the MT-A70-like family. (530 aa)    
Predicted Functional Partners:
C7M84_024464
Methyltransferase-like protein 14-like protein; Belongs to the MT-A70-like family.
  
 
0.995
C7M84_015069
Putative pre-mRNA-splicing regulator WTAP.
   
 0.986
C7M84_005441
Uncharacterized protein.
  
    0.759
C7M84_000357
ERCC3_RAD25_C domain-containing protein.
  
    0.759
C7M84_022725
Putative ATP-dependent RNA helicase YTHDC2.
    
 
 0.711
C7M84_009626
U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family.
   
  
 0.688
C7M84_020965
Putative E3 ubiquitin-protein ligase Hakai.
    
 
 0.682
C7M84_008518
Putative RNA-binding protein 15.
    
 
 0.680
C7M84_023271
Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
 
 0.679
C7M84_019036
Uncharacterized protein.
    
   0.672
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.