STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_005506Protein kinase domain-containing protein. (544 aa)    
Predicted Functional Partners:
C7M84_005813
Putative DDB1-and CUL4-associated factor 7 isoform X1.
   
 
 0.696
C7M84_003851
Small ubiquitin-related modifier.
    
 0.511
C7M84_003653
Ubiquitin-conjugating enzyme E2 c; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.486
C7M84_023821
Peptidyl-prolyl cis-trans isomerase.
    
 0.434
C7M84_006024
Ataxia telangiectasia mutated; Belongs to the PI3/PI4-kinase family.
    
 0.433
C7M84_015166
Protein kinase domain-containing protein.
  
 
   0.424
C7M84_007637
Putative serine/threonine protein kinase IRE isoform X1.
    
 
 0.415
C7M84_021776
Putative casein kinase I isoform gamma-3 isoform X4.
  
  
 0.412
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.