STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_005439Putative symplekin-like. (679 aa)    
Predicted Functional Partners:
C7M84_006844
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.970
C7M84_012331
Putative cleavage and polyadenylation specificity factor 73.
   
 0.969
C7M84_005526
Cleavage and polyadenylation specificity factor subunit 4.
    
 0.966
C7M84_002793
Cleavage and polyadenylation specificity factor subunit 1.
    
 0.966
C7M84_001524
Protein suppressor of forked.
    
 0.965
C7M84_019266
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.964
C7M84_008805
Uncharacterized protein.
    
 0.963
C7M84_000056
Cleavage stimulation factor 64 kDa subunit.
   
 0.963
C7M84_021035
Putative WD repeat-containing protein 82.
   
 
 0.924
C7M84_023829
WD repeat-containing protein 33.
    
 0.920
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.