STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_004951Uncharacterized protein. (800 aa)    
Predicted Functional Partners:
C7M84_014806
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.993
C7M84_019110
Conserved oligomeric Golgi complex subunit 4.
    
 0.993
C7M84_023734
Putative conserved oligomeric Golgi complex subunit 8.
    
 0.990
C7M84_012476
Putative vesicle transport through interaction with t-SNAREs-like 1A-like.
   
 
 0.916
C7M84_020787
t-SNARE coiled-coil homology domain-containing protein.
    
 0.910
C7M84_013356
Conserved oligomeric Golgi complex subunit 7.
    
 0.893
C7M84_013355
Putative conserved oligomeric Golgi complex subunit 7.
    
 0.893
C7M84_004986
Putative conserved oligomeric Golgi complex subunit 7.
    
 0.893
C7M84_004988
Putative conserved oligomeric Golgi complex subunit 7 isoform X1.
    
 0.893
C7M84_018635
Putative BET1-like.
    
 0.880
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.