STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_004280Putative ETS-likeous factor-like isoform X3. (368 aa)    
Predicted Functional Partners:
C7M84_005849
Putative retinoic acid receptor beta isoform X5.
  
 
   0.494
C7M84_021927
Putative paired box protein Pax-2a-like.
  
     0.478
C7M84_009792
NK2-3/5 transcription factor.
  
 
   0.476
C7M84_015667
Muscle-specific calpain.
  
   
 0.466
C7M84_016909
SoxB2.
  
     0.461
C7M84_012506
Putative diencephalon/mesencephalon homeobox protein 1-B-like.
  
     0.444
C7M84_024966
Putative 5-hydroxytryptamine receptor 1A-alpha-like.
  
     0.441
C7M84_006267
Bone morphogenetic protein 5/8.
  
     0.439
C7M84_010674
Aristaless.
  
     0.437
C7M84_006735
Tankyrase.
  
     0.429
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.