STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_004204Voltage-dependent anion-selective channel. (282 aa)    
Predicted Functional Partners:
C7M84_001770
Uncharacterized protein.
   
 0.851
C7M84_024975
Uncharacterized protein.
    
 0.850
C7M84_000555
Autophagy protein 5; Involved in autophagic vesicle formation.
     
 0.737
C7M84_015600
Mitochondrial Rho GTPase 1.
    
 0.733
C7M84_004148
Uncharacterized protein.
   
 0.731
C7M84_000918
Putative COP9 signalosome complex subunit 4.
 
 
  
 0.729
C7M84_008275
Uncharacterized protein.
   
 
 0.715
C7M84_017630
Uncharacterized protein.
   
 0.714
C7M84_005129
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.693
C7M84_016241
Uncharacterized protein; Belongs to the FGGY kinase family.
   
 
 0.683
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.