STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_004110Glucose dehydrogenase. (597 aa)    
Predicted Functional Partners:
C7M84_005178
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.928
C7M84_012360
Putative cholinephosphotransferase 1-like isoform X1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.813
C7M84_009896
Putative ethanolaminephosphotransferase 1-like; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.808
C7M84_000818
Uncharacterized protein.
     
 0.805
C7M84_022231
Phosphatidylserine synthase 2.
     
  0.800
C7M84_021381
Putative lysophospholipid acyltransferase 1; Belongs to the membrane-bound acyltransferase family.
     
  0.800
C7M84_008435
Putative intraflagellar transport protein 56-like isoform X3.
    
 0.616
C7M84_016961
Tetratricopeptide repeat protein 30.
    
 0.610
C7M84_020340
Phospholipase D alpha 1.
     
 0.607
C7M84_008512
Putative phospholipase D gamma 1-like.
     
 0.607
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.