STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_003911B9 domain-containing protein 1. (214 aa)    
Predicted Functional Partners:
C7M84_010304
Transforming growth factor beta-1-like protein.
  
0.983
C7M84_002166
Putative Meckel syndrome type 1 protein isoform 2.
    
 0.936
C7M84_004201
Putative coiled-coil and C2 domain-containing protein 2A isoform X1.
    
 0.931
C7M84_011119
Putative jouberin isoform X2.
    
 0.914
C7M84_002484
Putative tectonic-2-like isoform X1.
     
 0.796
C7M84_023990
Uncharacterized protein.
    
 0.783
C7M84_012093
Putative LYR motif-containing protein 1; Belongs to the complex I LYR family.
    
 0.783
C7M84_017075
CEP209_CC5 domain-containing protein.
   
  
 0.673
C7M84_013174
Putative methyltransferase-like protein 22 isoform X1.
    
 0.602
C7M84_013175
Uncharacterized protein.
    
 0.602
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.