STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_003854Membrane magnesium transporter 2. (112 aa)    
Predicted Functional Partners:
C7M84_012010
Tetratricopeptide repeat protein 35.
    
 0.968
C7M84_011929
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.959
C7M84_010640
ER membrane protein complex subunit 3.
   
 
 0.954
C7M84_007220
Putative secreted protein.
    
 
 0.938
C7M84_002920
COX4 neighbor protein.
    
 0.926
C7M84_002353
Putative ER membrane protein complex subunit 7-like.
   
 
 0.897
C7M84_002372
Putative membrane protein.
   
 
 0.897
C7M84_012915
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
      
 0.565
C7M84_007788
Translocation protein SEC63-like.
    
 
 0.562
C7M84_001877
PPM-type phosphatase domain-containing protein.
      
 0.541
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.