STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_002993Xylosyltransferase oxt. (771 aa)    
Predicted Functional Partners:
C7M84_009334
Beta-1,4-galactosyltransferase 7.
     
 0.935
C7M84_017156
Hexosyltransferase.
    
 
 0.713
C7M84_008931
Putative extracellular matrix protein FRAS1.
   
 
 0.576
C7M84_016186
Putative exostosin-3; Belongs to the glycosyltransferase 47 family.
      
 0.560
C7M84_004394
Pikachurin.
    
 0.490
C7M84_019962
Uncharacterized protein.
    
 0.457
C7M84_019929
Putative DNA repair endonuclease XPF.
   
 0.443
C7M84_016951
DNA repair endonuclease XPF.
   
 0.443
C7M84_021158
Putative glypican-4 isoform X1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.432
C7M84_023209
Glypican-5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.432
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.