STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_001465Uncharacterized protein. (673 aa)    
Predicted Functional Partners:
C7M84_007788
Translocation protein SEC63-like.
   
 
 0.709
C7M84_005081
Putative transmembrane protein 70-like, mitochondrial.
      
 0.584
C7M84_003931
Putative wolframin-like.
      
 0.573
C7M84_009188
Putative CCR4-NOT transcription complex subunit 2.
      
 0.565
C7M84_009249
Uncharacterized protein.
   
  
 0.546
C7M84_008025
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.510
C7M84_011827
Putative Popeye domain-containing protein.
      
 0.503
C7M84_008120
Putative transport protein Sec61 alpha subunit.
   
  
 0.474
C7M84_011158
Plug_translocon domain-containing protein.
   
  
 0.474
C7M84_018992
Plug_translocon domain-containing protein.
   
  
 0.474
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.