STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_000128Protein tyrosine phosphatase domain-containing protein 1. (667 aa)    
Predicted Functional Partners:
C7M84_005836
Uncharacterized protein.
    
  0.797
C7M84_011335
Dopamine receptor type 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.565
C7M84_011278
Putative golgin subfamily A member 4-like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.556
C7M84_014940
Putative inositol-pentakisphosphate 2-kinase isoform X2.
      
 0.547
C7M84_016587
Wntless protein.
    
 0.449
C7M84_014569
Wntless protein.
    
 0.449
C7M84_006105
Uncharacterized protein.
    
 0.449
C7M84_014122
Putative histone-lysine N-methyltransferase CG1716 isoform X1.
    
 
 0.419
C7M84_014121
Putative histone-lysine N-methyltransferase.
    
 
 0.419
C7M84_001575
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
    
 0.405
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.