STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_025437Putative endoplasmic reticulum lectin 1-like. (189 aa)    
Predicted Functional Partners:
C7M84_006070
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.964
C7M84_005781
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.963
C7M84_008712
Putative E3 ubiquitin-protein ligase synoviolin isoform X1.
   
 0.899
C7M84_003796
Uncharacterized protein.
   
 0.899
C7M84_014820
Protein sel-1-like protein.
   
 0.843
C7M84_004467
Sel-1-like protein 2.
   
 0.843
C7M84_012328
Putative spermatogenesis-associated protein 5-like protein 1; Belongs to the AAA ATPase family.
    
 0.786
C7M84_012060
Uncharacterized protein.
    
 0.786
C7M84_002897
Valosin-containing protein; Belongs to the AAA ATPase family.
    
 0.786
C7M84_022867
Uncharacterized protein.
   
 0.777
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.