STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_024972Carboxypeptidase A1. (132 aa)    
Predicted Functional Partners:
C7M84_002321
Putative apolipoprotein D; Belongs to the calycin superfamily. Lipocalin family.
      
 0.403
C7M84_024484
Putative low-density lipoprotein receptor-related protein 2-like.
      
 0.400
C7M84_011598
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
      
 0.400
C7M84_012501
Putative apolipoprotein D-like; Belongs to the calycin superfamily. Lipocalin family.
      
 0.400
C7M84_006888
Crustacyanin-C1 subunit.
      
 0.400
C7M84_023413
Putative apolipoprotein D-like; Belongs to the calycin superfamily. Lipocalin family.
      
 0.400
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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