STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_023901Uncharacterized protein. (253 aa)    
Predicted Functional Partners:
C7M84_020248
N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein.
  
 
 0.983
C7M84_022132
Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C.
     
 0.970
C7M84_018745
Phosphatidylinositol N-acetylglucosaminyltransferase subunit P; Part of the complex catalyzing the transfer of N- acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.
     
 0.964
C7M84_007482
Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q.
     
 0.964
C7M84_002137
Phosphatidylinositol-glycan biosynthesis class W protein; Probable acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor.
     
 0.916
C7M84_024816
Putative N-acetylglucosamine-6-phosphate deacetylase.
    
 0.903
C7M84_010859
Putative cysteinyl-tRNA synthetase, mitochondrial.
  
 
 0.902
C7M84_014394
Cysteine--tRNA ligase, cytoplasmic.
  
 
 0.902
C7M84_018478
Putative sentrin-specific protease 8.
    
 0.868
C7M84_002038
Uncharacterized protein.
    
  0.810
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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