STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_023836DnaJ-like protein subfamily C member 13. (1720 aa)    
Predicted Functional Partners:
C7M84_023837
Uncharacterized protein.
 
     0.950
C7M84_003896
Uncharacterized protein.
   
  
 0.728
C7M84_003895
Cyclin G-associated kinase.
   
  
 0.728
C7M84_002140
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.586
C7M84_008684
Sorting nexin-2.
    
 
 0.550
C7M84_007306
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
      
 0.497
C7M84_016997
Putative H(Beta)58 protein.
      
 0.416
C7M84_012302
Uncharacterized protein.
      
 0.414
C7M84_003754
High temperature requirement serine protease HtrA2.
      
 0.408
C7M84_000630
Putative N-acylneuraminate cytidylyltransferase.
    
 
 0.407
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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