STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_023797Putative FYVE, RhoGEF and PH domain-containing protein 6-like. (212 aa)    
Predicted Functional Partners:
C7M84_005532
Protein kinase domain-containing protein.
      
 0.570
C7M84_018834
MCU domain-containing protein.
     
 0.557
C7M84_003134
Putative calcium uptake protein 1-like, mitochondrial isoform X2.
   
 0.553
C7M84_019210
Putative ras-related GTP-binding protein A.
    
 
 0.450
C7M84_005739
Uncharacterized protein.
    
 
 0.428
C7M84_020338
Prohibitin.
    
  0.422
C7M84_007647
Putative synaptotagmin 1-like isoform X2.
      
 0.410
C7M84_020173
39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
      
 0.403
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.