STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_023714Glutamate synthase. (1894 aa)    
Predicted Functional Partners:
C7M84_010495
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.991
C7M84_012116
Uncharacterized protein.
  
 0.973
C7M84_007956
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
0.973
C7M84_012114
Gastrolith protein 30.
  
 0.973
C7M84_012118
Putative peritrophin-44-like.
  
 0.973
C7M84_012117
Uncharacterized protein.
  
 0.973
C7M84_005978
Pyrroline-5-carboxylate synthetase.
    
 0.935
C7M84_011849
Glutamine amidotransferase type-2 domain-containing protein.
  
 
 0.932
C7M84_022036
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 
 0.908
C7M84_010014
Isocitrate dehydrogenase.
    
 0.900
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.