STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_023387Heat shock protein 40. (336 aa)    
Predicted Functional Partners:
C7M84_005986
Putative stress-induced-phosphoprotein 1.
   
 0.668
C7M84_020137
Heat shock protein 70; Belongs to the heat shock protein 70 family.
  
 0.649
C7M84_004669
Heat shock protein 70; Belongs to the heat shock protein 70 family.
  
 0.649
C7M84_000496
Heat shock protein 70.
  
 0.649
C7M84_020402
Heat shock protein 70; Belongs to the heat shock protein 70 family.
  
 0.649
C7M84_020136
Heat shock protein 70; Belongs to the heat shock protein 70 family.
  
 0.649
C7M84_012995
Heat shock protein 70.
  
 0.649
HSC70
Heat shock cognate 70; Belongs to the heat shock protein 70 family.
  
 0.649
C7M84_005748
Putative peptidyl-prolyl cis-trans isomerase D.
  
 
 0.584
C7M84_020810
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 0.584
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.