STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_023325Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
C7M84_019754
Acetylcholine receptor subunit alpha-like 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.497
C7M84_009738
Nicotinic acetylcholine receptor, alpha1 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.492
C7M84_005946
Uncharacterized protein.
  
     0.488
C7M84_002168
Nicotinic acetylcholine receptor subunit alpha 10; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.483
C7M84_000926
Putative GABA-gated ion channel GRD isoform X2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
  
  0.481
C7M84_001665
Nicotinic acetylcholine receptor alpha 2 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.474
C7M84_000816
Gamma-aminobutyric acid receptor subunit rho-1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.469
C7M84_023547
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
  
     0.460
C7M84_003846
Putative gamma-aminobutyric-acid receptor alpha-2 subunit.
  
  
  0.455
C7M84_024377
Putative acetylcholine receptor subunit alpha-type acr-16-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.449
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.