STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_022767Putative transcription initiation factor TFIID subunit 3 isoform X2. (478 aa)    
Predicted Functional Partners:
C7M84_011844
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.953
C7M84_022005
Putative transcription initiation factor tfii-D.
    
 0.944
C7M84_023631
Putative transcription initiation factor TFIID subunit 13.
    
 0.927
C7M84_000695
Putative transcription initiation factor TFIID subunit 7.
    
 0.922
C7M84_008247
Putative transcription initiation factor TFIID subunit 12.
    
 0.920
C7M84_018641
Putative transcription initiation factor TFIID subunit 2-like.
    
 0.919
C7M84_011159
Putative transcription initiation factor TFIID subunit 1 isoform X2.
    
 0.918
C7M84_005534
Putative transcription initiation factor TFIID subunit 4-like isoform 2.
    
 0.899
C7M84_010612
Tbp-associated factor.
    
 0.849
C7M84_021619
TATA box binding protein.
    
 0.814
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.