STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_008497Uncharacterized protein. (427 aa)    
Predicted Functional Partners:
C7M84_024486
Histone H2A deubiquitinase MYSM1.
    
 0.610
C7M84_016445
Putative brahma-associated protein of 60 kDa isoform X2.
    
 0.524
C7M84_006230
Uncharacterized protein.
    
 0.467
C7M84_012209
Uncharacterized protein.
    
 0.467
C7M84_012481
SWI/SNF complex subunit SMARCC2.
    
 0.465
C7M84_007448
Activation factor subunit spp27.
    
 0.453
C7M84_008305
Putative trithorax group protein osa isoform X2.
    
 0.412
C7M84_002225
Putative trithorax group protein osa isoform X5.
    
 0.412
C7M84_001235
Uncharacterized protein; Belongs to the actin family.
    
 0.406
C7M84_001236
Actin-like protein 6A.
    
 0.406
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.