STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_007678Uncharacterized protein. (520 aa)    
Predicted Functional Partners:
C7M84_013180
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.938
C7M84_023949
Prophenoloxidase activating factor serine proteinase.
    
  0.843
C7M84_023953
Putative trypsin-1-like; Belongs to the peptidase S1 family.
    
  0.843
C7M84_023952
Putative trypsin-1-like isoform X1; Belongs to the peptidase S1 family.
    
  0.843
C7M84_023947
Putative coagulation factor XII isoform X1; Belongs to the peptidase S1 family.
    
  0.843
C7M84_009904
Putative ras-like GTP-binding protein RhoL.
   
 0.741
C7M84_009418
Cdc42-like protein.
   
 0.741
C7M84_016781
RhoA.
   
 0.741
C7M84_008392
RhoA.
   
 0.741
C7M84_018008
Uncharacterized protein.
   
 0.741
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.