STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_010237Putative mitochondrial import inner membrane translocase subunit Tim10. (96 aa)    
Predicted Functional Partners:
C7M84_021701
Putative mitochondrial import inner membrane translocase subunit Tim8; Belongs to the small Tim family.
   
 0.989
C7M84_013919
Cactin.
   
 0.966
C7M84_012507
Mitochondrial import inner membrane translocase subunit Tim22.
   
 0.966
C7M84_014491
DAGKc domain-containing protein.
    
 
 0.846
C7M84_000036
Ribosomal_S7 domain-containing protein.
   
    0.846
C7M84_011264
CHCH domain-containing protein.
   
 0.834
C7M84_024975
Uncharacterized protein.
   
 0.818
C7M84_010467
Mitochondrial import inner membrane translocase subunit Tim17-B-like protein.
   
 
 0.815
C7M84_008417
Putative mitochondrial import inner membrane translocase subunit Tim17-B-like.
   
 
 0.815
C7M84_023177
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
   
 0.815
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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