Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMF96382.1 | AMF96385.1 | AL538_00885 | AL538_00900 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.460 |
| AMF96382.1 | AMF96386.1 | AL538_00885 | AL538_00905 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.411 |
| AMF96382.1 | AMF96387.1 | AL538_00885 | AL538_00910 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.490 |
| AMF96382.1 | proQ | AL538_00885 | AL538_00890 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | RNA chaperone ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.824 |
| AMF96382.1 | yebR | AL538_00885 | AL538_00895 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.647 |
| AMF96385.1 | AMF96382.1 | AL538_00900 | AL538_00885 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | 0.460 |
| AMF96385.1 | AMF96386.1 | AL538_00900 | AL538_00905 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.725 |
| AMF96385.1 | AMF96387.1 | AL538_00900 | AL538_00910 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
| AMF96385.1 | proQ | AL538_00900 | AL538_00890 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA chaperone ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.462 |
| AMF96385.1 | yebR | AL538_00900 | AL538_00895 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.608 |
| AMF96385.1 | yebU | AL538_00900 | AL538_00915 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | 0.519 |
| AMF96386.1 | AMF96382.1 | AL538_00905 | AL538_00885 | Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | 0.411 |
| AMF96386.1 | AMF96385.1 | AL538_00905 | AL538_00900 | Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.725 |
| AMF96386.1 | AMF96387.1 | AL538_00905 | AL538_00910 | Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.955 |
| AMF96386.1 | proQ | AL538_00905 | AL538_00890 | Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA chaperone ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.424 |
| AMF96386.1 | yebR | AL538_00905 | AL538_00895 | Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.548 |
| AMF96386.1 | yebU | AL538_00905 | AL538_00915 | Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | 0.593 |
| AMF96387.1 | AMF96382.1 | AL538_00910 | AL538_00885 | Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | 0.490 |
| AMF96387.1 | AMF96385.1 | AL538_00910 | AL538_00900 | Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
| AMF96387.1 | AMF96386.1 | AL538_00910 | AL538_00905 | Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.955 |
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