STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALU73969.1Iron-dependent repressor; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)    
Predicted Functional Partners:
ALU73973.1
Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.958
ALU73970.1
Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.888
ALU73971.1
Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.818
ALU73972.1
Zinc transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.783
fur
Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.
  
  
 0.568
ALU73968.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.556
ALU74584.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.459
ALU74988.1
Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.407
tpx
Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.
  
  
 0.407
Your Current Organism:
Tenacibaculum dicentrarchi
NCBI taxonomy Id: 669041
Other names: CECT 7612, NCIMB 14598, T. dicentrarchi, Tenacibaculum dicentrarchi Pineiro-Vidal et al. 2012, Tenacibaculum sp. 35/09, strain 35/09
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.