STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selOHypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (521 aa)    
Predicted Functional Partners:
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.729
ALU74097.1
Peptide methionine sulfoxide reductase MsrB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.710
ALU76075.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.594
ALU74094.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.586
ALU74522.1
Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
      0.539
ALU74098.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
Your Current Organism:
Tenacibaculum dicentrarchi
NCBI taxonomy Id: 669041
Other names: CECT 7612, NCIMB 14598, T. dicentrarchi, Tenacibaculum dicentrarchi Pineiro-Vidal et al. 2012, Tenacibaculum sp. 35/09, strain 35/09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.