STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
dipQFlavin-dependent oxygenase, PedJ-like protein; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. (374 aa)    
Predicted Functional Partners:
dipP
COG3321 Polyketide synthase modules and related proteins; Belongs to the enoyl-CoA hydratase/isomerase family.
 
   
 0.982
dipO
Mixed type I polyketide synthase/non-ribosomal peptide synthetase, PedH-like protein; COG3321 Polyketide synthase modules and related proteins.
 
   
 0.958
dipB
4'-phosphopantetheinyl transferase, EntD-like protein; COG2977 Phosphopantetheinyl transferase component of siderophore synthetase; Belongs to the P-Pant transferase superfamily.
 
   
 0.839
dipN
Flavin-containing monooxygenase, PedG-like protein; COG2072 Predicted flavoprotein involved in K+ transport.
     
 0.796
dipT
Mixed type I polyketide synthase/non-ribosomal peptide synthetase, PedF-like protein; COG3321 Polyketide synthase modules and related proteins.
 
   
 0.563
dipM
Methyltransferase type 11, PedE-like protein; COG0500 SAM-dependent methyltransferases.
 
     0.541
dipJ
ABC transporter permease protein, LivH-like protein; COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
     
 0.524
ribAB
Bifunctional riboflavin biosynthesis protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
    0.505
dipS
Polyketide biosynthesis acyltransferase-like protein, PedC-like protein; COG3321 Polyketide synthase modules and related proteins.
     0.478
dipR
Polyketide beta-ketoacyl:acyl carrier protein synthase, PedM-like protein; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.431
Your Current Organism:
Profftella armatura
NCBI taxonomy Id: 669502
Other names: C. Profftella armatura, Candidatus Profftella armatura, syncytium symbiont of Diaphorina citri
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