STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dipKABC transporter substrate-binding protein, LivK-like protein; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component. (393 aa)    
Predicted Functional Partners:
dipJ
ABC transporter permease protein, LivH-like protein; COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
dipI
ABC transporter permease protein, LivM-like protein; COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
dipH
ABC transporter ATP-binding protein, LivG-like protein; COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
 0.998
dipG
ABC transporter ATP-binding protein, LivF-like protein; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
 0.998
dipF
COG0236 Acyl carrier protein.
  
    0.533
rsmI
uroporphyrin-III C/tetrapyrrole methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
   0.527
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
 
 0.521
AGS07007.1
DNA polymerase III subunit delta; COG0470 ATPase involved in DNA replication.
   
   0.510
dipL
Putative FMN-dependent oxidoreductase, PedB-like protein; COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
  
    0.486
rpmE2
COG0254 Ribosomal protein L31.
  
    0.477
Your Current Organism:
Profftella armatura
NCBI taxonomy Id: 669502
Other names: C. Profftella armatura, Candidatus Profftella armatura, syncytium symbiont of Diaphorina citri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.