STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dipCPolyketide biosynthesis enoyl-CoA hydratase, PedL-like protein; COG1024 Enoyl-CoA hydratase/carnithine racemase. (251 aa)    
Predicted Functional Partners:
dipP
COG3321 Polyketide synthase modules and related proteins; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.989
dipO
Mixed type I polyketide synthase/non-ribosomal peptide synthetase, PedH-like protein; COG3321 Polyketide synthase modules and related proteins.
 
  
 0.945
dipE
acetyl-S-AcpK beta-ketothioester polyketide intermediate transferase, PedP-like protein; COG3425 3-hydroxy-3-methylglutaryl CoA synthase.
 
  
 0.921
AGS06957.1
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.915
rpmG
COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
   
 
 0.886
rpsI
COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.886
rpsP
COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
  
   0.883
rpmJ
COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.880
rplQ
COG0203 Ribosomal protein L17.
   
   0.878
maeB
COG0281 Malic enzyme.
  
  
 0.877
Your Current Organism:
Profftella armatura
NCBI taxonomy Id: 669502
Other names: C. Profftella armatura, Candidatus Profftella armatura, syncytium symbiont of Diaphorina citri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.