STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dipB4'-phosphopantetheinyl transferase, EntD-like protein; COG2977 Phosphopantetheinyl transferase component of siderophore synthetase; Belongs to the P-Pant transferase superfamily. (222 aa)    
Predicted Functional Partners:
dipP
COG3321 Polyketide synthase modules and related proteins; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.992
dipO
Mixed type I polyketide synthase/non-ribosomal peptide synthetase, PedH-like protein; COG3321 Polyketide synthase modules and related proteins.
 
 
 0.976
dipQ
Flavin-dependent oxygenase, PedJ-like protein; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
   
 0.839
dipS
Polyketide biosynthesis acyltransferase-like protein, PedC-like protein; COG3321 Polyketide synthase modules and related proteins.
 
 
 
 0.698
dipT
Mixed type I polyketide synthase/non-ribosomal peptide synthetase, PedF-like protein; COG3321 Polyketide synthase modules and related proteins.
 
 
 
 0.638
dipF
COG0236 Acyl carrier protein.
   
 
 0.606
dipC
Polyketide biosynthesis enoyl-CoA hydratase, PedL-like protein; COG1024 Enoyl-CoA hydratase/carnithine racemase.
     
 0.560
rimM
16S rRNA-processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.
  
     0.443
dipA
COG0331 (acyl-carrier-protein) S-malonyltransferase.
       0.437
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
  
    0.432
Your Current Organism:
Profftella armatura
NCBI taxonomy Id: 669502
Other names: C. Profftella armatura, Candidatus Profftella armatura, syncytium symbiont of Diaphorina citri
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