STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dipTMixed type I polyketide synthase/non-ribosomal peptide synthetase, PedF-like protein; COG3321 Polyketide synthase modules and related proteins. (9019 aa)    
Predicted Functional Partners:
dipP
COG3321 Polyketide synthase modules and related proteins; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.944
dipO
Mixed type I polyketide synthase/non-ribosomal peptide synthetase, PedH-like protein; COG3321 Polyketide synthase modules and related proteins.
 
 
0.888
dipE
acetyl-S-AcpK beta-ketothioester polyketide intermediate transferase, PedP-like protein; COG3425 3-hydroxy-3-methylglutaryl CoA synthase.
 
  
 0.852
dipA
COG0331 (acyl-carrier-protein) S-malonyltransferase.
 
  
 0.807
dipC
Polyketide biosynthesis enoyl-CoA hydratase, PedL-like protein; COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
  
 0.799
dipF
COG0236 Acyl carrier protein.
 
   
 0.781
dipS
Polyketide biosynthesis acyltransferase-like protein, PedC-like protein; COG3321 Polyketide synthase modules and related proteins.
 
     0.767
dipB
4'-phosphopantetheinyl transferase, EntD-like protein; COG2977 Phosphopantetheinyl transferase component of siderophore synthetase; Belongs to the P-Pant transferase superfamily.
 
 
 
 0.638
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
       0.634
dipQ
Flavin-dependent oxygenase, PedJ-like protein; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
   
 0.563
Your Current Organism:
Profftella armatura
NCBI taxonomy Id: 669502
Other names: C. Profftella armatura, Candidatus Profftella armatura, syncytium symbiont of Diaphorina citri
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