Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGS06957.1 | atpA | SSDC_01340 | SSDC_01065 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.878 |
| AGS06957.1 | dipC | SSDC_01340 | SSDC_00715 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | Polyketide biosynthesis enoyl-CoA hydratase, PedL-like protein; COG1024 Enoyl-CoA hydratase/carnithine racemase. | 0.915 |
| AGS06957.1 | dipP | SSDC_01340 | SSDC_00650 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | COG3321 Polyketide synthase modules and related proteins; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.980 |
| AGS06957.1 | etfA | SSDC_01340 | SSDC_01445 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | COG2025 Electron transfer flavoprotein, alpha subunit. | 0.999 |
| AGS06957.1 | etfB | SSDC_01340 | SSDC_01440 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | COG2086 Electron transfer flavoprotein, beta subunit. | 0.999 |
| AGS06957.1 | fdxA | SSDC_01340 | SSDC_01735 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | 4Fe-4S ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.847 |
| AGS06957.1 | maeB | SSDC_01340 | SSDC_01390 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | COG0281 Malic enzyme. | 0.936 |
| AGS06957.1 | nuoI | SSDC_01340 | SSDC_00605 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.847 |
| AGS06957.1 | ribD | SSDC_01340 | SSDC_01345 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.859 |
| AGS06957.1 | sdhB | SSDC_01340 | SSDC_00415 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.889 |
| atpA | AGS06957.1 | SSDC_01065 | SSDC_01340 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | 0.878 |
| atpA | dipP | SSDC_01065 | SSDC_00650 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | COG3321 Polyketide synthase modules and related proteins; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.848 |
| atpA | etfA | SSDC_01065 | SSDC_01445 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | COG2025 Electron transfer flavoprotein, alpha subunit. | 0.675 |
| atpA | fdxA | SSDC_01065 | SSDC_01735 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 4Fe-4S ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.541 |
| atpA | nuoI | SSDC_01065 | SSDC_00605 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.541 |
| atpA | sdhB | SSDC_01065 | SSDC_00415 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.813 |
| dipC | AGS06957.1 | SSDC_00715 | SSDC_01340 | Polyketide biosynthesis enoyl-CoA hydratase, PedL-like protein; COG1024 Enoyl-CoA hydratase/carnithine racemase. | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | 0.915 |
| dipC | dipP | SSDC_00715 | SSDC_00650 | Polyketide biosynthesis enoyl-CoA hydratase, PedL-like protein; COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG3321 Polyketide synthase modules and related proteins; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.989 |
| dipC | etfA | SSDC_00715 | SSDC_01445 | Polyketide biosynthesis enoyl-CoA hydratase, PedL-like protein; COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG2025 Electron transfer flavoprotein, alpha subunit. | 0.655 |
| dipC | etfB | SSDC_00715 | SSDC_01440 | Polyketide biosynthesis enoyl-CoA hydratase, PedL-like protein; COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG2086 Electron transfer flavoprotein, beta subunit. | 0.633 |
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