Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGS06957.1 | atpA | SSDC_01340 | SSDC_01065 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.878 |
| AGS06957.1 | dipC | SSDC_01340 | SSDC_00715 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | Polyketide biosynthesis enoyl-CoA hydratase, PedL-like protein; COG1024 Enoyl-CoA hydratase/carnithine racemase. | 0.915 |
| AGS06957.1 | dipP | SSDC_01340 | SSDC_00650 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | COG3321 Polyketide synthase modules and related proteins; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.980 |
| AGS06957.1 | etfA | SSDC_01340 | SSDC_01445 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | COG2025 Electron transfer flavoprotein, alpha subunit. | 0.999 |
| AGS06957.1 | etfB | SSDC_01340 | SSDC_01440 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | COG2086 Electron transfer flavoprotein, beta subunit. | 0.999 |
| AGS06957.1 | maeB | SSDC_01340 | SSDC_01390 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | COG0281 Malic enzyme. | 0.936 |
| AGS06957.1 | sucC | SSDC_01340 | SSDC_01775 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.780 |
| AGS06957.1 | sucD | SSDC_01340 | SSDC_01770 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.813 |
| atpA | AGS06957.1 | SSDC_01065 | SSDC_01340 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | 0.878 |
| atpA | dipF | SSDC_01065 | SSDC_00700 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | COG0236 Acyl carrier protein. | 0.523 |
| atpA | dipP | SSDC_01065 | SSDC_00650 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | COG3321 Polyketide synthase modules and related proteins; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.848 |
| atpA | etfA | SSDC_01065 | SSDC_01445 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | COG2025 Electron transfer flavoprotein, alpha subunit. | 0.675 |
| atpA | pheT | SSDC_01065 | SSDC_00385 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | phenylalanyl-tRNA synthetase subunit beta; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.870 |
| atpA | sucC | SSDC_01065 | SSDC_01775 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.823 |
| atpA | sucD | SSDC_01065 | SSDC_01770 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.812 |
| dipC | AGS06957.1 | SSDC_00715 | SSDC_01340 | Polyketide biosynthesis enoyl-CoA hydratase, PedL-like protein; COG1024 Enoyl-CoA hydratase/carnithine racemase. | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | 0.915 |
| dipC | dipF | SSDC_00715 | SSDC_00700 | Polyketide biosynthesis enoyl-CoA hydratase, PedL-like protein; COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG0236 Acyl carrier protein. | 0.833 |
| dipC | dipP | SSDC_00715 | SSDC_00650 | Polyketide biosynthesis enoyl-CoA hydratase, PedL-like protein; COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG3321 Polyketide synthase modules and related proteins; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.989 |
| dipC | etfA | SSDC_00715 | SSDC_01445 | Polyketide biosynthesis enoyl-CoA hydratase, PedL-like protein; COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG2025 Electron transfer flavoprotein, alpha subunit. | 0.655 |
| dipC | etfB | SSDC_00715 | SSDC_01440 | Polyketide biosynthesis enoyl-CoA hydratase, PedL-like protein; COG1024 Enoyl-CoA hydratase/carnithine racemase. | COG2086 Electron transfer flavoprotein, beta subunit. | 0.633 |
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