Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGS06965.1 | AGS06982.1 | SSDC_01380 | SSDC_01485 | COG2914 Uncharacterized protein conserved in bacteria; Belongs to the UPF0125 (RnfH) family. | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.831 |
| AGS06982.1 | AGS06965.1 | SSDC_01485 | SSDC_01380 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | COG2914 Uncharacterized protein conserved in bacteria; Belongs to the UPF0125 (RnfH) family. | 0.831 |
| AGS06982.1 | AGS06983.1 | SSDC_01485 | SSDC_01490 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | COG4391 Uncharacterized protein conserved in bacteria. | 0.415 |
| AGS06982.1 | cysB | SSDC_01485 | SSDC_01670 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Regulatory protein CysB; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.427 |
| AGS06982.1 | fdx | SSDC_01485 | SSDC_00055 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Ferredoxin, 2Fe-2S type, ISC system; COG0633 Ferredoxin. | 0.425 |
| AGS06982.1 | holA | SSDC_01485 | SSDC_01140 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | COG1466 DNA polymerase III, delta subunit. | 0.429 |
| AGS06982.1 | maeB | SSDC_01485 | SSDC_01390 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | COG0281 Malic enzyme. | 0.589 |
| AGS06982.1 | metG | SSDC_01485 | SSDC_00760 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.432 |
| AGS06982.1 | nuoE | SSDC_01485 | SSDC_00585 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit. | 0.519 |
| AGS06982.1 | pheT | SSDC_01485 | SSDC_00385 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | phenylalanyl-tRNA synthetase subunit beta; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.493 |
| AGS06982.1 | rpmF | SSDC_01485 | SSDC_01495 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.429 |
| AGS06983.1 | AGS06982.1 | SSDC_01490 | SSDC_01485 | COG4391 Uncharacterized protein conserved in bacteria. | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.415 |
| AGS06983.1 | rpmF | SSDC_01490 | SSDC_01495 | COG4391 Uncharacterized protein conserved in bacteria. | COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.779 |
| cysB | AGS06982.1 | SSDC_01670 | SSDC_01485 | Regulatory protein CysB; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.427 |
| cysB | maeB | SSDC_01670 | SSDC_01390 | Regulatory protein CysB; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG0281 Malic enzyme. | 0.809 |
| fdx | AGS06982.1 | SSDC_00055 | SSDC_01485 | Ferredoxin, 2Fe-2S type, ISC system; COG0633 Ferredoxin. | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.425 |
| fdx | maeB | SSDC_00055 | SSDC_01390 | Ferredoxin, 2Fe-2S type, ISC system; COG0633 Ferredoxin. | COG0281 Malic enzyme. | 0.708 |
| fdx | nuoE | SSDC_00055 | SSDC_00585 | Ferredoxin, 2Fe-2S type, ISC system; COG0633 Ferredoxin. | COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit. | 0.896 |
| holA | AGS06982.1 | SSDC_01140 | SSDC_01485 | COG1466 DNA polymerase III, delta subunit. | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.429 |
| holA | pheT | SSDC_01140 | SSDC_00385 | COG1466 DNA polymerase III, delta subunit. | phenylalanyl-tRNA synthetase subunit beta; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.535 |
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