Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGS06947.1 | AGS06953.1 | SSDC_01290 | SSDC_01320 | Putative nonfunctional DNA polymerase I-like protein; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | COG0629 Single-stranded DNA-binding protein. | 0.465 |
| AGS06947.1 | dnaN | SSDC_01290 | SSDC_01605 | Putative nonfunctional DNA polymerase I-like protein; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.999 |
| AGS06947.1 | maeB | SSDC_01290 | SSDC_01390 | Putative nonfunctional DNA polymerase I-like protein; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | COG0281 Malic enzyme. | 0.534 |
| AGS06947.1 | mutY | SSDC_01290 | SSDC_00970 | Putative nonfunctional DNA polymerase I-like protein; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.447 |
| AGS06947.1 | pheT | SSDC_01290 | SSDC_00385 | Putative nonfunctional DNA polymerase I-like protein; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | phenylalanyl-tRNA synthetase subunit beta; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.961 |
| AGS06947.1 | tadA | SSDC_01290 | SSDC_01885 | Putative nonfunctional DNA polymerase I-like protein; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.443 |
| AGS06947.1 | thyA | SSDC_01290 | SSDC_00730 | Putative nonfunctional DNA polymerase I-like protein; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.494 |
| AGS06947.1 | ung | SSDC_01290 | SSDC_01595 | Putative nonfunctional DNA polymerase I-like protein; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.506 |
| AGS06953.1 | AGS06947.1 | SSDC_01320 | SSDC_01290 | COG0629 Single-stranded DNA-binding protein. | Putative nonfunctional DNA polymerase I-like protein; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | 0.465 |
| AGS06953.1 | dnaN | SSDC_01320 | SSDC_01605 | COG0629 Single-stranded DNA-binding protein. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.698 |
| AGS06953.1 | pheT | SSDC_01320 | SSDC_00385 | COG0629 Single-stranded DNA-binding protein. | phenylalanyl-tRNA synthetase subunit beta; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.697 |
| AGS06953.1 | ung | SSDC_01320 | SSDC_01595 | COG0629 Single-stranded DNA-binding protein. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.568 |
| dnaN | AGS06947.1 | SSDC_01605 | SSDC_01290 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Putative nonfunctional DNA polymerase I-like protein; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | 0.999 |
| dnaN | AGS06953.1 | SSDC_01605 | SSDC_01320 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | COG0629 Single-stranded DNA-binding protein. | 0.698 |
| dnaN | mutY | SSDC_01605 | SSDC_00970 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.687 |
| dnaN | pheT | SSDC_01605 | SSDC_00385 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | phenylalanyl-tRNA synthetase subunit beta; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.738 |
| dnaN | thyA | SSDC_01605 | SSDC_00730 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.843 |
| dnaN | ung | SSDC_01605 | SSDC_01595 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.748 |
| maeB | AGS06947.1 | SSDC_01390 | SSDC_01290 | COG0281 Malic enzyme. | Putative nonfunctional DNA polymerase I-like protein; COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | 0.534 |
| maeB | mutY | SSDC_01390 | SSDC_00970 | COG0281 Malic enzyme. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.547 |
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